BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B10SP1|AL427122
(694 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig803 1326 0.0
>3x_Contig803
Length = 2286
Score = 1326 bits (662), Expect = 0.0
Identities = 676/688 (98%)
Strand = Plus / Minus
Query: 7 ggtttgtwttctggtttgggcttgttggagaccatattgtctctgatattttggaacata 66
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 ggtttgtattctggtttgggcttgttggagaccatattgtctctgatattttggaacata 1140
Query: 67 tctcttttcttcwtaaaataattcawagtccggtttgtagacccgaatctatccacatta 126
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1139 tctcttttcttcataaaataattcaaagtccggtttgtagacccgaatctatccacatta 1080
Query: 127 ttgctgtatatggcactaagcgcagattctgctttaagagtaacttttaaggcactactt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 ttgctgtatatggcactaagcgcagattctgctttaagagtaacttttaaggcactactt 1020
Query: 187 aargttttctcgtaattagtcctgtagctttgtagttcattatgatacatgtcagcattt 246
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 aaagttttctcgtaattagtcctgtagctttgtagttcattatgatacatgtcagcattt 960
Query: 247 ttatctatttcacgtttcatcgctaacaaccttttttgaaacttctcattgaaaaatgca 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 ttatctatttcacgtttcatcgctaacaaccttttttgaaacttctcattgaaaaatgca 900
Query: 307 aggtcttcbttcttctttttgataacctcgtcatgttttgactttaaractatgttttca 366
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 899 aggtcttccttcttctttttgataacctcgtcatgttttgactttaaaactatgttttca 840
Query: 367 ttacttaarattgcracttttgtctcaagtcccctgtatctgctctcattattttttatt 426
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 ttacttaaaattgcaacttttgtctcaagtcccctgtatctgctctcattattttttatt 780
Query: 427 tctgtcaccttgttgtctattatcagatccaatagactgatacggtggtttaacttaacg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 tctgtcaccttgttgtctattatcagatccaatagactgatacggtggtttaacttaacg 720
Query: 487 atttcctcttcttttgaatccaatgccttctcgtagtctgttctgtcccaaacctttaar 546
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 atttcctcttcttttgaatccaatgccttctcgtagtctgttctgtcccaaacctttaaa 660
Query: 547 attctgcctctttcagcctttgagagatcttttratttagcaatttccctttcatgcttc 606
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 659 attctgcctctttcagcctttgagagatcttttaatttagcaatttccctttcatgcttc 600
Query: 607 actgacaaaagctccaaatcctttgcctttgtctccacttgctttttcaaagaacgattt 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 actgacaaaagctccaaatcctttgcctttgtctccacttgctttttcaaagaacgattt 540
Query: 667 tstacctccaatgagcttattatgatgt 694
| ||||||||||||||||||||| ||||
Sbjct: 539 tctacctccaatgagcttattataatgt 512
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5369
Number of Sequences: 1807
Number of extensions: 5369
Number of successful extensions: 121
Number of sequences better than 1.0e-20: 1
length of query: 694
length of database: 10,358,551
effective HSP length: 16
effective length of query: 678
effective length of database: 10,329,639
effective search space: 7003495242
effective search space used: 7003495242
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)